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CAG Easy Plot: Visualize. Analyze. Discover.

Stop wrestling with complicated plotting libraries. CAG EasyPlot gives you professional-grade visualization tools designed specifically for biological and scientific data. Upload your data, customize your plots, and download publication-ready figures in minutes.

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Platform Analytics

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Purpose-Built for Scientific Data

We understand that scientific data is unique. That's why we've created specialized tools for the exact types of analysis you perform every day.

MD Simulation Plotter

Generate high-quality visualizations from molecular dynamics trajectory and structure files.

Key Features:

•RMSD, RMSF, Gyration, SASA, and H-Bond plots
•PCA and Covariance analysis
•Energy, Temperature, Pressure, and Density plots
•Simulation Snapshots
•Simulation Videos

Supported Formats:

XVG, CSV, Trajectory (XTC, TRR), Structure (PDB, GRO)

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General Data Plotter

Your go-to tool for everyday data visualization with extensive customization and plot types.

Key Features:

•Line, scatter, bar, area, pie, and dot plots
•Box, histogram, and violin plots
•Correlation heatmaps
•Data normalization and aggregation
•Customizable themes and formatting

Supported Formats:

CSV, TSV, Excel (XLSX, XLS), JSON, Parquet, Feather, TXT

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Gene Enrichment Analysis

Perform comprehensive pathway analysis and GO enrichment to uncover biological meaning in your gene lists.

Key Features:

•Gene Ontology (GO) and KEGG enrichment
•Reactome and WikiPathways analysis
•Bar, bubble, dotplot, network, and volcano plots
•Automatic pathway highlighting
•Multiple testing correction (BH, Bonferroni)

Supported Formats:

CSV, TSV, Excel, TXT (Gene lists)

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KEGG Pathway Mapper

Visualize your genes directly on KEGG pathway maps to understand metabolic and signaling pathways.

Key Features:

•Map genes to official KEGG pathways
•Color-code by expression levels or fold changes
•Highlight multiple gene sets simultaneously
•Download high-quality pathway images

Supported Formats:

KEGG IDs, Gene symbols, Expression matrices (CSV, TSV, Excel)

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RNA-Seq Analysis Suite

Visualize differential expression analysis pipelines from RNA-seq count matrices and results.

Key Features:

•Volcano and MA plots
•PCA and sample quality assessment
•Hierarchical clustering and heatmaps
•Differential expression analysis visualization

Supported Formats:

Count matrices (CSV, TSV), Results tables

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Genomic Variant Visualization

Comprehensive tool for visualizing genomic variants and GWAS results with publication-quality plots.

Key Features:

•Interactive Manhattan plots
•Rainfall plots for mutational kataegis
•Variant Density and Chromosome Distribution
•Clinical Significance and Variant Impact plots
•Transition/Transversion (Ti/Tv) ratios

Supported Formats:

VCF, CSV, TSV, Excel

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Statistical Analysis

Comprehensive statistical suite tailored for biological data hypothesis testing and analysis.

Key Features:

•Descriptive statistics and frequency analysis
•T-Tests, ANOVA, MANOVA, Z-Test
•Correlation, Covariance, Regression
•PCA and LDA
•Normality and Variance Tests

Supported Formats:

CSV, TSV, Excel, JSON

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Molecular Bioviz

Advanced 3D visualization for exploring protein conformations and molecular structures.

Key Features:

•Interactive 3D molecular viewer
•Support for PDB and SDF structures
•Trajectory visualization
•Customizable representations (Cartoon, Sphere, Stick)

Supported Formats:

PDB, SDF, CIF, XYZ

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Why Researchers Choose CAG EasyPlot

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Save Hours of Work

No more writing custom scripts or fighting with Excel. Our optimized algorithms handle large datasets smoothly, letting you focus on the science, not the software.

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Publication-Ready Quality

Every plot is designed to meet journal standards. Customize fonts, colors, and sizes to match your publication requirements. Export in vector formats for perfect clarity at any size.

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No Installation Required

Works right in your browser on any device. No software to install, no dependencies to manage, no compatibility issues. Just upload your data and start creating beautiful visualizations immediately.

Start Creating Better Visualizations Today

Join thousands of researchers who trust CAG EasyPlot for their data visualization needs. No credit card required, no time limits, just powerful tools that work.

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